High-density genetic maps

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August undefined, 2024

Web21 de nov. de 2024 · Integration of three genetic maps and anchoring scaffolds into the integrated map. The DS reference genome scaffolds were anchored to the three genetic maps (Table 2). 2606, 2489 and 3143 unique markers from the MH, YM, and BD maps, corresponding to an average physical marker density of 7.4 markers/Mb, 7 markers/Mb, … WebNational Center for Biotechnology Information

High-quality genome assembly and genetic mapping reveal a …

Web1 de jul. de 2024 · Using specific-locus amplified fragment sequencing (SLAF-seq) technology, we constructed a high-density genetic linkage map with an average map … WebHigh-density genetic map, as a classic tool to study recombination, can be measured through comparing genetic and physical distances (cM/Mb) on the genome. The distribution of recombination is not uniformly distributed along the genome, and the location of recombination is more likely to occur in gene transcriptional start sites (TSSs) and … dark brethren sea of thieves guide

High-density genetic map construction and identification …

Web1 de nov. de 2024 · High-density genetic maps and their anchoring information to the H. vulgare genetic maps (International Barley Sequencing Consortium, 2012; Mascher et … Web1 de abr. de 2024 · High-resolution genetic maps are widely used in gene cloning, mapping of quantitative trait loci (QTL), and genomic studies in various crops. The marker density … Web26 de fev. de 2024 · Grape white rot (Coniothyrium diplodiella) is a major fungal disease affecting grape yield and quality. Quantitative trait locus (QTL) analysis is an important method for studying important horticultural traits of grapevine. This study was conducted to construct a high-density map and conduct QTL mapping for grapevine white rot … biscay cross

A high-density genetic map for anchoring genome sequences …

High-Density Genetic Linkage Maps Provide Novel Insights Into

Web20 de jun. de 2024 · High-density genetic maps can significantly improve the resolution of QTL mapping. We constructed a high-density recombination bin-based genetic map of eggplant based on 200 F2 plants from an ... biscay foral delegation palaceWeb12 de ago. de 2014 · Soybean is an important oil seed crop, but very few high-density genetic maps have been published for this species. Specific length amplified fragment sequencing (SLAF-seq) is a recently developed high-resolution strategy for large scale de novo discovery and genotyping of single nucleotide polymorphisms. SLAF-seq was … biscay bay flannel

"Web10 de jul. de 2024 · It relates to a method for differentiating recombinant inbred line (RIL) mapping individuals and various accessions of rice; a method of generating an RPGA-based high-density genetic linkage map of rice; a method for pan-genome -based QTL mapping in rice to identify one or more mapped markers linked to QTLs governing the specific … " - High-density genetic maps

High-density genetic maps

A High-Density Genetic Map for Soybean Based on Specific …

Web29 de nov. de 2024 · The sorghum-sudangrass hybrid is a vital annual gramineous herbage. Few reports exist on its ultra-high-density genetic map. In this study, we sought to create an ultra-high-density genetic linkage map for this hybrid to strengthen its functional genomics research and genetic breeding. We used 150 sorghum-sudangrass hybrid F2 … WebThis identified 1,539 single-nucleotide polymorphisms (SNPs) and 80 InDel markers that provided a high-density genetic linkage map with a total length of 3036.9 cM. …

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Web11 de abr. de 2024 · KLW1 was dominant in conditioning higher kernel weight and functioned mainly through affecting kernel length. Using F2 plants derived from KLW1 NIL, a high-density genetic map covering the QTL was constructed. KLW1 was consequently confined to the 0.6 cM Xwgrc4219-Xwgrc4067 interval by evaluating the recombinant … http://www.zjnyxb.cn/CN/Y2024/V35/I3/590

Web22 de nov. de 2024 · A high-density genetic map and growth related QTL mapping in bighead carp (Hypophthalmichthys nobilis). Scientific Reports 6 , 28679 (2016). Article ADS CAS Google Scholar WebWhole-genome resequencing (WGRS) of mapping populations has facilitated development of high-density genetic maps essential for fine mapping and candidate gene discovery …

Web22 de nov. de 2024 · A high-density genetic map and growth related QTL mapping in bighead carp (Hypophthalmichthys nobilis). Scientific Reports 6 , 28679 (2016). Article … WebThis identified 1,539 single-nucleotide polymorphisms (SNPs) and 80 InDel markers that provided a high-density genetic linkage map with a total length of 3036.9 cM. Quantitative trait locus mapping identified 15 QTLs for watermelon fruit quality-related traits, including β-carotene and lycopene content in fruit flesh, fruit shape index, skin thickness, flesh color, …

WebHistorical genetic introgression has been reported between them; however, the existence of introgression and its … High-density genetic variation maps reveal the correlation …

Web14 de mai. de 2024 · Unravelling the genetic architecture underlying yield components and agronomic traits is important for enhancing crop productivity. Here, a recombinant inbred line (RIL) population, developed from ICC 4958 and DCP 92–3 cross, was used for constructing linkage map and QTL mapping analysis. The RIL population was genotyped using a … biscayne 112 reviewsWeb6 de fev. de 2024 · Estimate genetic linkage maps for markers on a single chromosome (or in a single linkage group) from pairwise recombination fractions or intermarker distances using weighted metric multidimensional scaling. The methods are suitable for autotetraploid as well as diploid populations. Options for assessing the fit to a known map are also … biscayne 2 bedroom singleWeb12 de jul. de 2016 · Construction of a high-resolution genetic map based on the SLAF-seq. A high-density linkage map could bridge the gap between genomic and targeted breeding. The level of polymorphisms presented in cultivated flue-cured tobacco is low, as in many other crop species. A total of 2415 (47 %) functional markers were polymorphic between … biscay cityWeb12 de mar. de 2024 · 关键词: 丝瓜, bin标记, 种间遗传图谱, 果长, QTL定位 Abstract: To explore the construction of a high-density genetic map of Luffa spp. and to identify the genetic loci for fruit length variation, a BC 1 population of 67 individuals was developed by crossing two inbred lines, Luffa acutangula ‘Shengyou’ and L. cylindrica ‘Pingguo’, with … biscay chevyWeb10 de jul. de 2012 · The concurrent development of high-throughput genotyping platforms and next generation sequencing (NGS) has increased the number and density of genetic markers, the efficiency of constructing detailed linkage maps, and our ability to overlay recombination and physical maps of the genome. We developed an array for tomato with … dark brethren walkthroughWebThe genotypic data were used to construct a high-density genetic map of 43 linkage groups (LGs) with a total length of 3594.0 cm and a marker density of 0.37 cm. A total of 116 QTL for all nine traits was detected on 33 LGs, spreading to all wheat chromosomes, except for Chr. 7D. Of these, six QTL (CTa.ui-4B.1, Q.CTg1.ui-5B-2.1, ... biscayne 12 apartmentsWeb1 de nov. de 2024 · A high-density genetic map is a valuable tool for mapping quantitative trait loci (QTL) and marker-assisted breeding programs. In this study, a single nucleotide … biscayne 4 piece patio deep seating set